C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAS-like, estrogen-regulated, growth inhibitor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000256953 RERG-001 ENSG00000134533 9606 - 12:15107783-15221417 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000256953
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000256953 4.580±0.00 12.086±0.00 3.202±0.00 3.123±0.08 5.670±2.71 9.050±6.46 0.863±0.55 8.971±8.82 6.046±0.00 5.008±0.02 1.038±0.00 6.014±4.92 7.420±2.60 9.465±8.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000374 CIL_000374_0001 CGP 12:14973022-15348675
CIL_000375 CIL_000375_0001 CGP 12:15107783-15597399

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IDA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA:NAS small GTPase mediated signal transduction
GO:0008285 IDA negative regulation of cell proliferation
GO:0009725 IDA response to hormone
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0019003 TAS GDP binding
GO:0030308 IDA negative regulation of cell growth
GO:0030331 NAS estrogen receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117919 Rerg-001 protein_coding Mus_musculus 0 782
ENSMUST00000032347 Rerg-002 protein_coding Mus_musculus 0 717
ENSMUST00000119610 Rerg-004 protein_coding Mus_musculus 0 566

Loading