C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000374_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139053-ENSG00000134533 CGP 9606 12:14973022-15348675
GeneTranscriptPositionBiotype
ENSG00000134533 (RERG)
RAS-like, estrogen-regulated, growth inhibitor 		ENST00000256953 (RERG-001) 15107783-15221417 protein_coding
ENST00000393736 (RERG-007) 15121065-15348598 protein_coding
ENST00000437578 (RERG-008) 15346477-15348675 processed_transcript
ENST00000536465 (RERG-005) 15107817-15218051 protein_coding
ENST00000537647 (RERG-010) 15110927-15221406 protein_coding
ENST00000537717 (RERG-006) 15217096-15221268 retained_intron
ENST00000538313 (RERG-002) 15107790-15217629 protein_coding
ENST00000545567 (RERG-009) 15109409-15138163 protein_coding
ENST00000546331 (RERG-004) 15108607-15221417 protein_coding
ENSG00000139053 (PDE6H)
phosphodiesterase 6H, cGMP-specific, cone, gamma 		ENST00000266395 (PDE6H-001) 14973022-14981865 protein_coding
ENSG00000151490 (PTPRO)
protein tyrosine phosphatase, receptor type, O 		ENST00000281171 (PTPRO-001) 15322397-15597393 protein_coding
ENST00000348962 (PTPRO-002) 15322553-15597393 protein_coding
ENST00000442921 (PTPRO-004) 15546352-15597399 protein_coding
ENST00000445537 (PTPRO-006) 15546352-15597399 protein_coding
ENST00000535311 (PTPRO-011) 15546618-15580069 nonsense_mediated_decay
ENST00000535322 (PTPRO-012) 15580763-15587176 protein_coding
ENST00000538907 (PTPRO-009) 15565349-15580746 retained_intron
ENST00000542557 (PTPRO-005) 15546352-15597399 protein_coding
ENST00000543886 (PTPRO-003) 15322543-15517063 protein_coding
ENST00000544244 (PTPRO-007) 15546352-15597399 protein_coding
ENST00000544706 (PTPRO-010) 15595221-15596574 processed_transcript
ENST00000545023 (PTPRO-008) 15322777-15410766 processed_transcript
ENSG00000255660 (RERG-AS1)
RERG antisense RNA 1 		ENST00000541243 (RERG-AS1-001) 15151923-15155283 lincRNA
ENSG00000255727 (LINC01489)
long intergenic non-protein coding RNA 1489 		ENST00000542689 (LINC01489-001) 15001833-15006683 lincRNA
ENSG00000256283 (METTL8P1)
methyltransferase like 8 pseudogene 1 		ENST00000428182 (METTL8P1-001) 15255213-15255823 processed_pseudogene
ENSG00000256650 (RERG-IT1)
RERG intronic transcript 1 (non-protein coding) 		ENST00000539734 (RERG-IT1-001) 15112363-15114698 sense_intronic
CIL_000374_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000064330-ENSMUSG00000030222 CGP 10090 6:136954523-137170497
GeneTranscriptPositionBiotype
ENSMUSG00000030222 (Rerg)
RAS-like, estrogen-regulated, growth-inhibitor 		ENSMUST00000032347 (Rerg-002) 137054825-137170497 protein_coding
ENSMUST00000117919 (Rerg-001) 137054831-137169732 protein_coding
ENSMUST00000119610 (Rerg-004) 137056099-137169685 protein_coding
ENSMUST00000149100 (Rerg-003) 137120660-137169708 processed_transcript
ENSMUSG00000064330 (Pde6h)
phosphodiesterase 6H, cGMP-specific, cone, gamma 		ENSMUST00000057650 (Pde6h-002) 136954533-136963483 retained_intron
ENSMUST00000137768 (Pde6h-001) 136954523-136968865 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000374_0001ENSG00000134533ENST00000256953ENST00000393736ENST00000437578ENST00000536465ENST00000537647ENST00000537717ENST00000538313ENST00000545567ENST00000546331ENSG00000139053ENST00000266395ENSG00000151490ENST00000281171ENST00000348962ENST00000442921ENST00000445537ENST00000535311ENST00000535322ENST00000538907ENST00000542557ENST00000543886ENST00000544244ENST00000544706ENST00000545023ENSG00000255660ENST00000541243ENSG00000255727ENST00000542689ENSG00000256283ENST00000428182ENSG00000256650ENST00000539734CIL_000374_0002ENSMUSG00000030222ENSMUST00000032347ENSMUST00000117919ENSMUST00000119610ENSMUST00000149100ENSMUSG00000064330ENSMUST00000057650ENSMUST00000137768
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000374_0001ENSG00000134533ENST00000256953ENST00000537647ENST00000537717ENST00000538313ENST00000546331ENSG00000139053ENST00000266395ENSG00000151490ENST00000281171ENST00000348962ENST00000442921ENST00000445537ENST00000535311ENST00000535322ENST00000538907ENST00000542557ENST00000543886ENST00000544244ENST00000544706ENSG00000255660ENST00000541243ENSG00000255727ENST00000542689ENSG00000256283ENST00000428182ENSG00000256650ENST00000539734CIL_000374_0002ENSMUSG00000030222ENSMUST00000032347ENSMUST00000117919ENSMUST00000119610ENSMUST00000149100ENSMUSG00000064330ENSMUST00000057650ENSMUST00000137768
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134533 ENST00000256953 4.580±0.00 12.086±0.00 3.202±0.00 3.123±0.08 5.670±2.71 9.050±6.46 0.863±0.55 8.971±8.82 6.046±0.00 5.008±0.02 1.038±0.00 6.014±4.92 7.420±2.60 9.465±8.33
ENST00000393736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.482±0.00 2.699±0.00 N/A
ENST00000537717 N/A N/A 47.325±0.00 15.164±0.00 13.463±0.00 8.405±0.00 2.300±0.00 2.851±0.00 28.779±0.00 23.651±0.00 3.388±0.00 N/A N/A N/A
ENST00000538313 N/A N/A N/A N/A N/A N/A 0.390±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000545567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546331 1.789±0.00 N/A 2.676±0.00 N/A N/A N/A 0.774±0.00 0.613±0.00 2.700±0.00 1.413±0.00 0.360±0.00 0.314±0.00 N/A 1.070±0.00
ENSG00000139053 ENST00000266395 N/A N/A N/A 0.505±0.00 0.081±0.00 N/A N/A N/A N/A N/A N/A N/A 0.559±0.42 0.046±0.00
ENSG00000151490 ENST00000281171 N/A N/A N/A 2.164±1.09 N/A N/A N/A 1.161±0.00 N/A N/A N/A N/A N/A N/A
ENST00000348962 N/A N/A 2.989±0.00 1.101±0.00 N/A 0.141±0.00 N/A 5.641±0.00 N/A N/A N/A N/A N/A N/A
ENST00000442921 N/A 0.294±0.00 N/A N/A N/A 1.218±0.00 N/A N/A N/A N/A N/A 0.520±0.14 0.253±0.00 0.320±0.00
ENST00000445537 N/A 0.333±0.00 0.726±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.772±0.65 0.145±0.00 N/A
ENST00000535311 N/A N/A N/A N/A N/A N/A N/A 0.756±0.00 N/A N/A N/A N/A N/A N/A
ENST00000535322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.250±0.00 N/A N/A N/A
ENST00000538907 N/A N/A N/A N/A 1.811±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542557 0.405±0.00 N/A N/A N/A 0.355±0.03 0.376±0.00 N/A N/A 0.161±0.01 0.907±0.00 0.082±0.00 0.679±0.56 1.072±0.36 0.262±0.00
ENST00000543886 N/A N/A N/A N/A N/A N/A N/A N/A 0.139±0.00 N/A 0.058±0.00 N/A N/A N/A
ENST00000544244 0.161±0.00 N/A N/A 0.652±0.00 N/A 0.149±0.00 N/A 0.808±0.53 N/A N/A N/A 0.667±0.00 0.199±0.05 N/A
ENST00000544706 N/A N/A N/A N/A N/A N/A N/A 0.862±0.00 0.167±0.00 N/A 0.256±0.00 0.561±0.00 N/A N/A
ENST00000545023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000255660 ENST00000541243 N/A N/A N/A N/A 0.264±0.00 0.210±0.00 0.201±0.00 N/A N/A N/A N/A N/A 0.363±0.00 0.131±0.01
ENSG00000255727 ENST00000542689 N/A 0.236±0.00 N/A 0.196±0.00 0.190±0.00 0.791±0.00 0.429±0.00 0.094±0.00 0.144±0.00 0.087±0.00 N/A 0.122±0.06 0.078±0.00 0.274±0.00
ENSG00000256283 ENST00000428182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A
ENSG00000256650 ENST00000539734 N/A 0.085±0.00 N/A N/A 1.974±1.32 0.117±0.00 0.040±0.00 0.125±0.00 N/A 0.292±0.00 N/A 0.147±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030222 ENSMUST00000032347 N/A N/A N/A N/A 1.102±0.00 N/A N/A N/A N/A N/A 0.461±0.06 8.723±4.94 0.619±0.48 1.136±0.29
ENSMUST00000117919 1.574±1.31 23.513±2.70 16.787±2.70 1.913±0.60 1.016±0.47 3.286±0.41 0.929±0.13 3.537±0.31 1.297±1.08 7.287±0.49 0.348±0.12 13.317±4.06 0.943±1.05 2.290±0.13
ENSMUST00000119610 N/A N/A N/A 4.000±0.00 N/A N/A 0.343±0.00 N/A 0.506±0.00 N/A 0.441±0.06 19.298±0.00 1.252±0.76 2.617±0.00
ENSMUST00000149100 1.687±1.12 126.833±12.26 N/A N/A 1.651±0.78 4.425±2.24 N/A 2.387±0.36 0.814±0.34 5.799±1.56 N/A 18.106±3.75 N/A N/A
ENSMUSG00000064330 ENSMUST00000057650 0.005±0.00 N/A 0.038±0.00 0.007±0.00 0.021±0.01 0.043±0.02 0.011±0.00 0.035±0.01 0.030±0.02 0.018±0.01 0.015±0.00 0.063±0.02 0.015±0.01 0.082±0.05
ENSMUST00000137768 0.010±0.00 N/A 0.033±0.00 0.004±0.00 0.010±0.00 0.046±0.04 0.014±0.00 0.034±0.01 0.013±0.02 0.020±0.01 N/A 0.054±0.02 0.013±0.01 0.049±0.04

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