C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium binding protein 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000258418 CAB39-001 ENSG00000135932 9606 + 2:230712845-230821075 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258418
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258418 16.931±0.00 11.156±0.00 6.088±0.00 13.645±9.61 9.197±6.53 11.103±5.36 12.868±10.15 10.980±7.29 9.627±2.16 12.558±6.96 17.207±11.04 11.162±3.22 11.504±2.98 15.610±4.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KY CIL_0004KY_0002 CGP 2:230712845-230879248

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IDA protein serine/threonine kinase activity
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0006468 IEA protein phosphorylation
GO:0007050 TAS cell cycle arrest
GO:0008286 TAS insulin receptor signaling pathway
GO:0018105 IDA peptidyl-serine phosphorylation
GO:0018107 IDA peptidyl-threonine phosphorylation
GO:0019900 IPI kinase binding
GO:0023014 IDA signal transduction by phosphorylation
GO:0030295 IDA protein kinase activator activity
GO:0032147 IEA activation of protein kinase activity
GO:0035556 IDA intracellular signal transduction
GO:0043234 IEA protein complex
GO:0043539 IDA protein serine/threonine kinase activator activity
GO:0051291 IEA protein heterooligomerization
GO:0070062 IDA extracellular vesicular exosome
GO:0071476 IC cellular hypotonic response
GO:0071902 IDA positive regulation of protein serine/threonine kinase activity
GO:1901017 IC negative regulation of potassium ion transmembrane transporter activity
GO:1901380 IC negative regulation of potassium ion transmembrane transport
GO:2000681 IC negative regulation of rubidium ion transport
GO:2000687 IC negative regulation of rubidium ion transmembrane transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113360 Cab39-001 protein_coding Mus_musculus 0 2010
ENSMUST00000097666 Cab39-002 protein_coding Mus_musculus 0 1760
ENSMUST00000118965 Gm5319-001 processed_pseudogene Mus_musculus 0 881
ENSMUST00000130754 Cab39-003 protein_coding Mus_musculus 0 446
ENSMUST00000187623 Cab39-005 retained_intron Mus_musculus 4e-22 111

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