C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium binding protein 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113360 Cab39-001 ENSMUSG00000036707 10090 + 1:85793441-85851576 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113360
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113360 24.049±5.70 57.703±4.82 57.238±6.99 28.001±13.07 28.592±9.47 76.425±17.45 12.123±6.07 26.561±4.84 18.002±2.63 41.529±4.99 48.609±3.41 45.355±14.65 20.980±13.15 7.645±2.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KY CIL_0004KY_0003 CGP 1:85793441-85908675

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005509 ISS calcium ion binding
GO:0005515 IEA protein binding
GO:0005737 IC cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0018105 IEA peptidyl-serine phosphorylation
GO:0018107 IEA peptidyl-threonine phosphorylation
GO:0019900 IEA kinase binding
GO:0023014 IEA signal transduction by phosphorylation
GO:0030295 ISS protein kinase activator activity
GO:0032147 IDA activation of protein kinase activity
GO:0035556 IEA intracellular signal transduction
GO:0043234 IEA protein complex
GO:0043539 IEA protein serine/threonine kinase activator activity
GO:0051291 IEA protein heterooligomerization
GO:0070062 IEA extracellular vesicular exosome
GO:0071902 IEA positive regulation of protein serine/threonine kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258418 CAB39-001 protein_coding Homo_sapiens 0 2010
ENST00000409788 CAB39-002 protein_coding Homo_sapiens 0 1496
ENST00000410084 CAB39-003 protein_coding Homo_sapiens 0 1496
ENST00000478152 CAB39-004 retained_intron Homo_sapiens 0 658
ENST00000493540 CAB39-005 retained_intron Homo_sapiens 0 265
ENST00000502277 CTD-2003D5.1-001 processed_pseudogene Homo_sapiens 0 294
ENST00000614925 CAB39-201 protein_coding Homo_sapiens 0 1683

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