C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000260983 HECW2-001 ENSG00000138411 9606 - 2:196194370-196592611 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000260983
Transcript ID Adrenal Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000260983 0.174±0.00 2.418±0.00 0.146±0.00 0.112±0.00 1.606±0.46 0.359±0.00 0.533±0.00 0.066±0.00 0.488±0.20 0.299±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KD CIL_0002KD_0001 CGP 2:196133566-196593692
CIL_0002KC CIL_0002KC_0001 CGP 2:196194370-196763490

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IBA:IEA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005634 IBA nucleus
GO:0005737 IBA cytoplasm
GO:0016874 IEA ligase activity
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087659 Hecw2-201 protein_coding Mus_musculus 0 7681
ENSMUST00000120904 Hecw2-001 protein_coding Mus_musculus 0 7675
ENSMUST00000097741 Hecw2-202 protein_coding Mus_musculus 0 1238
ENSDART00000090286 HECW2 (2 of 2)-201 protein_coding Danio_rerio 0 1147
ENSMUST00000152870 Hecw2-003 processed_transcript Mus_musculus 0 785
ENSMUST00000146850 Hecw2-002 retained_intron Mus_musculus 0 719
ENSMUST00000150677 Hecw2-004 processed_transcript Mus_musculus 0 396

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