C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261200 ABCC9-001 ENSG00000069431 9606 - 12:21797401-21936674 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261200
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261200 2.961±0.00 1.256±0.00 1.905±0.06 3.108±0.18 5.148±0.00 6.296±5.61 1.857±0.32 3.001±0.89 8.144±0.00 1.175±0.29 0.599±0.19 1.078±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090B CIL_00090B_0001 VISTA 12:21591137-22192666
CIL_0005PU CIL_0005PU_0001 CGP 12:21764955-21941402
CIL_0005PR CIL_0005PR_0001 CGP 12:21797401-22065674

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 TAS transporter activity
GO:0005267 IEA potassium channel activity
GO:0005524 IEA ATP binding
GO:0005886 TAS plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006810 IEA transport
GO:0006813 TAS potassium ion transport
GO:0007165 IEA signal transduction
GO:0007268 TAS synaptic transmission
GO:0008076 IDA voltage-gated potassium channel complex
GO:0008281 ISS sulfonylurea receptor activity
GO:0008282 ISS ATP-sensitive potassium channel complex
GO:0010107 ISS potassium ion import
GO:0015459 ISS potassium channel regulator activity
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0030017 IEA sarcomere
GO:0042383 IEA sarcolemma
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0044325 IPI ion channel binding
GO:0051607 IMP defense response to virus
GO:0055085 TAS:IEA transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100827 Abcc9-203 protein_coding Mus_musculus 0 4981
ENSMUST00000087527 Abcc9-202 protein_coding Mus_musculus 0 4809
ENSMUST00000073173 Abcc9-201 protein_coding Mus_musculus 0 2782
ENSMUST00000111771 Abcc9-204 protein_coding Mus_musculus 0 2483

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