C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100827 Abcc9-203 ENSMUSG00000030249 10090 - 6:142587862-142702274 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100827
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100827 7.546±1.82 2.263±0.55 7.743±0.46 1.696±0.81 3.938±0.88 3.217±0.66 11.137±0.90 1.975±0.36 1.549±0.43 2.373±0.15 3.635±0.00 4.207±1.85 0.240±0.09 0.194±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090B CIL_00090B_0002 VISTA 6:142366341-142969080
CIL_0005PU CIL_0005PU_0002 CGP 6:142564939-142702274
CIL_0005PR CIL_0005PR_0002 CGP 6:142587862-142775714

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005267 IMP potassium channel activity
GO:0005524 IEA ATP binding
GO:0005886 IDA plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0007165 IEA signal transduction
GO:0008281 IEA sulfonylurea receptor activity
GO:0030017 IDA sarcomere
GO:0042383 IDA sarcolemma
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0051607 ISO defense response to virus
GO:0071805 IMP potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000013990 abcc9-001 protein_coding Danio_rerio 0 442
ENSDART00000079987 abcc9-002 protein_coding Danio_rerio 0 254
ENST00000261200 ABCC9-001 protein_coding Homo_sapiens 0 4981
ENST00000261201 ABCC9-002 protein_coding Homo_sapiens 0 4809
ENST00000544039 ABCC9-003 protein_coding Homo_sapiens 0 2780

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