C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: von Willebrand factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261405 VWF-002 ENSG00000110799 9606 - 12:5948874-6124675 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261405
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261405 323.538±0.00 40.349±0.00 0.904±0.00 12.693±11.29 40.705±31.45 64.981±61.76 36.637±29.35 1.113±0.00 4.503±4.32 32.031±1.77 9.373±0.03 7.188±4.29 20.627±8.88 41.003±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001889 IEA liver development
GO:0001890 IEA placenta development
GO:0001948 IDA glycoprotein binding
GO:0002020 IPI protease binding
GO:0002576 TAS platelet degranulation
GO:0005178 IPI integrin binding
GO:0005515 IPI:IEA protein binding
GO:0005518 IDA collagen binding
GO:0005576 IDA extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005783 IDA endoplasmic reticulum
GO:0007155 IDA:IEA cell adhesion
GO:0007596 IMP:IEA blood coagulation
GO:0007597 TAS blood coagulation, intrinsic pathway
GO:0007599 IMP hemostasis
GO:0009611 TAS response to wounding
GO:0009897 IEA external side of plasma membrane
GO:0019865 IDA immunoglobulin binding
GO:0030168 NAS platelet activation
GO:0030198 TAS extracellular matrix organization
GO:0031012 IDA extracellular matrix
GO:0031091 NAS platelet alpha granule
GO:0031093 TAS platelet alpha granule lumen
GO:0031589 IDA cell-substrate adhesion
GO:0033093 IDA Weibel-Palade body
GO:0042802 IPI identical protein binding
GO:0042803 IDA protein homodimerization activity
GO:0047485 IPI protein N-terminus binding
GO:0051087 IDA chaperone binding
GO:0051260 IDA protein homooligomerization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001995 Vwf-201 protein_coding Mus_musculus 0 8065
ENSMUST00000112254 Vwf-001 protein_coding Mus_musculus 0 8065
ENSMUST00000134073 Vwf-007 processed_transcript Mus_musculus 0 2809
ENSMUST00000150548 Vwf-003 retained_intron Mus_musculus 0 1805
ENSMUST00000147101 Vwf-011 nonsense_mediated_decay Mus_musculus 0 1748
ENSMUST00000141521 Vwf-008 retained_intron Mus_musculus 0 1310
ENSMUST00000112253 Vwf-002 protein_coding Mus_musculus 0 1092
ENSMUST00000100941 Vwf-004 protein_coding Mus_musculus 0 1068
ENSMUST00000139678 Vwf-009 retained_intron Mus_musculus 0 294

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