C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cold shock domain containing E1, RNA-binding
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261443 CSDE1-003 ENSG00000009307 9606 - 1:114717295-114757974 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261443
Transcript ID Adipose Bladder Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261443 29.786±0.00 4.592±0.00 23.661±9.37 28.593±0.00 33.724±0.00 12.999±0.00 36.614±0.00 131.774±0.00 24.230±6.51 26.303±12.75 54.857±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008584 TAS male gonad development
GO:0044822 IDA poly(A) RNA binding
GO:0070937 IDA CRD-mediated mRNA stability complex
GO:0070966 IMP nuclear-transcribed mRNA catabolic process, no-go decay

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029446 Csde1-201 protein_coding Mus_musculus 0 4021

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