C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lipin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261596 LPIN2-001 ENSG00000101577 9606 - 18:2916994-3011947 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderColonKidneyLiverMuscleOvaryPlacentaTestisENST00000261596
Transcript ID Adrenal Bladder Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000261596 1.654±0.00 0.773±0.00 1.655±0.00 7.935±4.00 12.114±0.00 0.812±0.00 2.962±1.83 2.909±0.00 10.392±1.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003713 IEA:ISS transcription coactivator activity
GO:0005634 IEA nucleus
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005829 IEA cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006629 IEA:ISS lipid metabolic process
GO:0006631 IEA fatty acid metabolic process
GO:0006644 TAS phospholipid metabolic process
GO:0006646 TAS phosphatidylethanolamine biosynthetic process
GO:0006656 TAS phosphatidylcholine biosynthetic process
GO:0008195 IEA:ISS phosphatidate phosphatase activity
GO:0016311 IEA dephosphorylation
GO:0019432 TAS triglyceride biosynthetic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045944 IEA:ISS positive regulation of transcription from RNA polymerase II promoter
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126681 Lpin2-005 protein_coding Mus_musculus 0 2974
ENSMUST00000129635 Lpin2-001 protein_coding Mus_musculus 0 2966
ENSMUST00000142842 Lpin2-004 retained_intron Mus_musculus 0 1293
ENSMUST00000156570 Lpin2-002 protein_coding Mus_musculus 0 1157
ENSMUST00000154507 Lpin2-010 nonsense_mediated_decay Mus_musculus 0 843
ENSMUST00000135589 Lpin2-003 nonsense_mediated_decay Mus_musculus 0 785
ENSMUST00000133156 Lpin2-011 retained_intron Mus_musculus 0 682
ENSMUST00000053173 Lpin2-014 retained_intron Mus_musculus 0 477
ENSMUST00000156565 Lpin2-006 retained_intron Mus_musculus 0 377
ENSMUST00000149973 Lpin2-007 retained_intron Mus_musculus 0 364
ENSMUST00000125665 Lpin2-013 retained_intron Mus_musculus 0 327

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