C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: FAT atypical cadherin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261800 FAT2-001 ENSG00000086570 9606 - 5:151504094-151568944 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLiverPlacentaTestisENST00000261800
Transcript ID Breast Kidney Liver Placenta Testis
ENST00000261800 0.718±0.00 0.005±0.00 0.142±0.00 0.745±0.00 0.291±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UB CIL_0001UB_0001 CGP 5:151437046-151568944
CIL_00025X CIL_00025X_0001 CGP 5:151504093-151687165

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005886 IEA plasma membrane
GO:0005913 IDA cell-cell adherens junction
GO:0007156 ISS:IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0010631 IMP epithelial cell migration
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068853 Fat2-001 protein_coding Mus_musculus 0 11500
ENSMUST00000108864 Fat2-201 protein_coding Mus_musculus 0 11490

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