C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 4, epsilon 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261842 AP4E1-001 ENSG00000081014 9606 + 15:50908673-51005900 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000261842
Transcript ID Adipose Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000261842 1.757±0.00 0.481±0.00 1.667±0.00 0.244±0.00 0.652±0.22 1.224±0.00 0.554±0.09 0.649±0.21 0.829±0.00 0.503±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024D CIL_00024D_0001 CGP 15:50702266-51005900

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005488 IEA binding
GO:0005794 IEA Golgi apparatus
GO:0005905 IEA coated pit
GO:0006886 IEA intracellular protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0030117 IEA membrane coat
GO:0030126 IEA COPI vesicle coat

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002063 Ap4e1-001 protein_coding Mus_musculus 0 2776
ENSMUST00000177372 Ap4e1-007 nonsense_mediated_decay Mus_musculus 0 1548
ENSMUST00000110394 Ap4e1-004 protein_coding Mus_musculus 0 1511
ENSMUST00000175663 Ap4e1-008 nonsense_mediated_decay Mus_musculus 0 1349
ENSMUST00000149254 Ap4e1-003 retained_intron Mus_musculus 0 1031
ENSMUST00000110393 Ap4e1-005 nonsense_mediated_decay Mus_musculus 0 532
ENSMUST00000142740 Ap4e1-006 nonsense_mediated_decay Mus_musculus 0 379
ENSMUST00000129859 Ap4e1-002 retained_intron Mus_musculus 0 220
ENSMUST00000168162 Pdgfra-202 protein_coding Mus_musculus 0.00003 57
ENSMUST00000000476 Pdgfra-201 protein_coding Mus_musculus 0.00003 57

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