C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 130
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261947 RNF130-003 ENSG00000113269 9606 - 5:179955453-180072101 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261947
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261947 19.600±0.00 14.114±0.00 0.979±0.00 9.309±2.60 26.221±0.00 8.779±4.89 8.748±0.00 16.655±2.09 9.174±4.48 8.853±3.71 3.325±0.00 18.593±9.10 17.862±4.00 11.208±5.41

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006915 IEA apoptotic process
GO:0008270 IEA zinc ion binding
GO:0012501 ISS programmed cell death
GO:0016021 IEA integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054684 Rnf130-002 protein_coding Mus_musculus 0 2006
ENSMUST00000102776 Rnf130-001 protein_coding Mus_musculus 0 1701
ENSMUST00000143607 Rnf130-003 processed_transcript Mus_musculus 0 695

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