C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubinuclein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262376 UBN1-001 ENSG00000118900 9606 + 16:4847631-4882360 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262376
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262376 11.447±0.00 5.566±0.00 3.207±1.56 4.228±1.13 5.262±1.17 6.132±4.52 3.367±0.00 3.549±1.73 4.473±0.00 4.246±2.51 8.448±4.77 7.414±2.30 38.222±20.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001G7 CIL_0001G7_0001 CGP 16:4796968-4847342
CIL_00004T CIL_00004T_0001 CGP 16:4803203-4882360
CIL_0001FC CIL_0001FC_0001 CGP 16:4846665-4960741

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA:TAS nucleus
GO:0005654 TAS nucleoplasm
GO:0005923 ISS tight junction
GO:0006336 IDA DNA replication-independent nucleosome assembly
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0010923 IDA negative regulation of phosphatase activity
GO:0016032 IEA viral process
GO:0016568 IEA chromatin modification

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052449 Ubn1-201 protein_coding Mus_musculus 0 4045

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