C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAS p21 protein activator 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262940 RASA4-001 ENSG00000105808 9606 - 7:102579646-102616757 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262940
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262940 2.051±0.00 9.891±0.00 3.165±2.12 2.319±2.00 2.176±1.83 0.744±0.55 1.458±1.31 0.780±0.43 2.313±1.08 3.611±1.69 4.745±2.27 2.783±0.93 2.663±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y6 CIL_0007Y6_0001 VISTA 7:102540897-103142421

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA:IDA GTPase activator activity
GO:0005099 IBA Ras GTPase activator activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IBA cytoplasm
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0007165 IEA signal transduction
GO:0031235 IBA intrinsic component of the cytoplasmic side of the plasma membrane
GO:0032318 IEA regulation of Ras GTPase activity
GO:0032320 IBA positive regulation of Ras GTPase activity
GO:0035556 IEA intracellular signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0046580 IBA negative regulation of Ras protein signal transduction
GO:0046872 IEA metal ion binding
GO:0051056 IEA regulation of small GTPase mediated signal transduction
GO:0071277 IMP cellular response to calcium ion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042135 Rasa4-001 protein_coding Mus_musculus 0 2377
ENSMUST00000100570 Rasa4-006 protein_coding Mus_musculus 0 1459
ENSMUST00000152723 Rasa4-005 retained_intron Mus_musculus 0 1338
ENSMUST00000135344 Rasa4-004 retained_intron Mus_musculus 0 1338
ENSMUST00000140972 Rasa4-007 retained_intron Mus_musculus 0 1061
ENSMUST00000125048 Rasa4-003 retained_intron Mus_musculus 0 1050
ENSMUST00000134509 Rasa4-002 retained_intron Mus_musculus 0 1050
ENSMUST00000131353 Rasa4-008 retained_intron Mus_musculus 0 499
ENSMUST00000122887 Rasa4-011 protein_coding Mus_musculus 0 377
ENSMUST00000145294 Rasa4-010 nonsense_mediated_decay Mus_musculus 0 305
ENSMUST00000125247 Rasa4-009 processed_transcript Mus_musculus 2.8026e-45 189
ENSMUST00000040474 Tbc1d24-201 protein_coding Mus_musculus 0.000000000002 81
ENSMUST00000167791 Tbc1d24-203 protein_coding Mus_musculus 0.000000000002 81
ENSMUST00000168410 Tbc1d24-205 protein_coding Mus_musculus 0.000000000002 81
ENSMUST00000097376 Tbc1d24-202 protein_coding Mus_musculus 0.000000000002 81
ENSMUST00000171189 Tbc1d24-206 protein_coding Mus_musculus 0.000000000002 81
ENSMUST00000168378 Tbc1d24-204 protein_coding Mus_musculus 0.000000000002 81

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