C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAS p21 protein activator 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125048 Rasa4-003 ENSMUSG00000004952 10090 + 5:136083998-136109961 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryENSMUST00000125048
Transcript ID Muscle Ovary
ENSMUST00000125048 1.771±0.54 1.151±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GU CIL_0001GU_0002 CGP 5:136054492-136111860

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262940 RASA4-001 protein_coding Homo_sapiens 0 1050
ENST00000306682 RASA4B-003 protein_coding Homo_sapiens 0 1038
ENST00000418645 AC004985.12-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 233
ENST00000424092 RASA4CP-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1014
ENST00000449970 RASA4-004 protein_coding Homo_sapiens 0 1050
ENST00000460726 RASA4DP-001 unprocessed_pseudogene Homo_sapiens 0 809
ENST00000461209 RASA4-003 protein_coding Homo_sapiens 0 1050
ENST00000462172 RASA4-002 protein_coding Homo_sapiens 0 1050
ENST00000465829 RASA4B-001 protein_coding Homo_sapiens 0 1050
ENST00000467351 RASA4B-004 retained_intron Homo_sapiens 1e-27 128
ENST00000477184 RASA4B-002 retained_intron Homo_sapiens 0 257
ENST00000488284 RASA4B-005 retained_intron Homo_sapiens 0 501
ENST00000495352 RASA4B-006 retained_intron Homo_sapiens 0 632
ENST00000514917 RP11-514P8.7-001 protein_coding Homo_sapiens 0 257
ENST00000519539 RASA4-014 nonsense_mediated_decay Homo_sapiens 0 464
ENST00000519541 RP11-514P8.6-001 nonsense_mediated_decay Homo_sapiens 0 1050
ENST00000520042 RASA4-012 protein_coding Homo_sapiens 0 490
ENST00000520577 RASA4-017 retained_intron Homo_sapiens 0 359
ENST00000521076 RASA4-011 protein_coding Homo_sapiens 0 311
ENST00000521397 RASA4-016 protein_coding Homo_sapiens 0 599
ENST00000521822 RASA4-018 processed_transcript Homo_sapiens 2e-28 130
ENST00000521892 RASA4-008 retained_intron Homo_sapiens 0 326
ENST00000522223 RASA4-007 retained_intron Homo_sapiens 0 638
ENST00000522443 RASA4-009 retained_intron Homo_sapiens 0 392
ENST00000522801 RASA4-010 protein_coding Homo_sapiens 0 833
ENST00000523568 RASA4-005 retained_intron Homo_sapiens 0 678
ENST00000541662 RASA4B-201 protein_coding Homo_sapiens 0 1050

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