C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CSE1 chromosome segregation 1-like (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262982 CSE1L-001 ENSG00000124207 9606 + 20:49046312-49096952 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262982
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262982 10.985±0.00 10.390±0.00 5.465±0.00 13.786±2.15 8.228±0.00 9.777±4.08 6.947±4.27 9.361±3.71 3.996±0.00 6.960±2.17 10.292±6.20 16.671±1.87 12.495±1.44 47.756±7.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XQ CIL_0001XQ_0001 CGP 20:48921890-49096960
CIL_0001XR CIL_0001XR_0001 CGP 20:49046246-49188367

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006611 TAS protein export from nucleus
GO:0006886 IEA intracellular protein transport
GO:0006915 TAS apoptotic process
GO:0008262 TAS importin-alpha export receptor activity
GO:0008283 TAS cell proliferation
GO:0008536 IEA Ran GTPase binding
GO:0016020 IDA membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002790 Cse1l-001 protein_coding Mus_musculus 0 3795
ENSMUST00000168599 Cse1l-007 protein_coding Mus_musculus 0 2532
ENSMUST00000145819 Cse1l-002 retained_intron Mus_musculus 0 1644
ENSMUST00000163437 Cse1l-008 protein_coding Mus_musculus 0 1640
ENSMUST00000169290 Cse1l-006 nonsense_mediated_decay Mus_musculus 0 1482
ENSMUST00000132402 Cse1l-004 retained_intron Mus_musculus 0 837
ENSMUST00000166871 Cse1l-011 processed_transcript Mus_musculus 0 821
ENSMUST00000171410 Cse1l-010 processed_transcript Mus_musculus 0 808
ENSMUST00000135139 Cse1l-003 retained_intron Mus_musculus 0 416
ENSMUST00000164974 Cse1l-012 nonsense_mediated_decay Mus_musculus 0 265

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