C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal peptidase complex subunit 2 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263672 SPCS2-001 ENSG00000118363 9606 + 11:74949247-74979031 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000263672
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000263672 2.197±0.00 2.699±0.00 4.783±0.74 3.015±0.83 3.867±0.00 0.986±0.00 4.581±0.00 5.558±0.00 3.494±0.00 0.520±0.00 6.627±0.59 7.047±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I3 CIL_0008I3_0001 VISTA 11:74770295-75374240

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005787 IEA signal peptidase complex
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006412 TAS translation
GO:0006465 IEA signal peptide processing
GO:0006508 IEA proteolysis
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0008233 IEA peptidase activity
GO:0010467 TAS gene expression
GO:0016021 IEA integral component of membrane
GO:0044267 TAS cellular protein metabolic process
GO:0050796 TAS regulation of insulin secretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036274 Spcs2-201 protein_coding Mus_musculus 0 966
ENSMUST00000122326 Spcs2-ps-001 unprocessed_pseudogene Mus_musculus 0 870

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