C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family B (MDR/TAP), member 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263817 ABCB11-001 ENSG00000073734 9606 - 2:168922938-169031322 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaENST00000263817
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta
ENST00000263817 0.024±0.00 0.022±0.00 0.061±0.05 0.011±0.00 0.018±0.00 10.568±0.00 0.009±0.00 0.037±0.00 0.016±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HC CIL_0008HC_0001 VISTA 2:168815051-169417863
CIL_0006HX CIL_0006HX_0001 CGP 2:168901240-169031322
CIL_0006HZ CIL_0006HZ_0001 CGP 2:168922938-169096167

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 TAS transporter activity
GO:0005524 IEA ATP binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006699 TAS bile acid biosynthetic process
GO:0006810 TAS:IEA transport
GO:0008206 TAS bile acid metabolic process
GO:0008554 TAS sodium-exporting ATPase activity, phosphorylative mechanism
GO:0015126 IBA canalicular bile acid transmembrane transporter activity
GO:0015432 TAS bile acid-exporting ATPase activity
GO:0015721 TAS bile acid and bile salt transport
GO:0015722 IBA canalicular bile acid transport
GO:0016020 TAS membrane
GO:0016021 IBA:IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0035725 TAS sodium ion transmembrane transport
GO:0042626 IBA:IEA ATPase activity, coupled to transmembrane movement of substances
GO:0044281 TAS small molecule metabolic process
GO:0045177 IEA apical part of cell
GO:0046581 IEA intercellular canaliculus
GO:0055085 IBA:IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102710 Abcb11-001 protein_coding Mus_musculus 0 3674
ENSMUST00000102709 Abcb11-002 protein_coding Mus_musculus 0 3651
ENSMUST00000180142 Abcb11-201 protein_coding Mus_musculus 0 3602
ENSDART00000102557 abcb11b-201 protein_coding Danio_rerio 0 355

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