C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (RNA) I polypeptide A, 194kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263857 POLR1A-001 ENSG00000068654 9606 - 2:86020216-86106155 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyLiverLungOvaryTestisENST00000263857
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Testis
ENST00000263857 1.967±0.00 0.376±0.00 1.412±0.00 0.819±0.00 0.399±0.11 0.506±0.00 0.884±0.00 0.622±0.00 1.252±0.00 2.155±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WR CIL_0007WR_0001 VISTA 2:85469895-86073896
CIL_00084P CIL_00084P_0001 VISTA 2:85470344-86073882

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001054 IBA RNA polymerase I activity
GO:0003677 IEA DNA binding
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005730 IDA nucleolus
GO:0005736 IEA DNA-directed RNA polymerase I complex
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006360 TAS transcription from RNA polymerase I promoter
GO:0006361 TAS transcription initiation from RNA polymerase I promoter
GO:0006362 TAS transcription elongation from RNA polymerase I promoter
GO:0006363 TAS termination of RNA polymerase I transcription
GO:0008270 IEA zinc ion binding
GO:0010467 TAS gene expression

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000055296 Polr1a-201 protein_coding Mus_musculus 0 5262
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000005 60

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