C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HECT and RLD domain containing E3 ubiquitin protein ligase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264345 HERC3-201 ENSG00000138641 9606 + 4:88605794-88708541 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264345
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264345 2.096±0.00 2.887±0.00 4.256±1.13 2.286±0.80 3.620±0.00 3.994±1.33 3.890±0.39 2.753±1.78 3.686±1.30 2.679±0.21 2.931±0.07 3.415±0.49 2.662±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IBA:IEA ubiquitin-protein transferase activity
GO:0005634 IBA nucleus
GO:0016874 IEA ligase activity
GO:0031410 IEA cytoplasmic vesicle
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041401 Herc3-001 protein_coding Mus_musculus 0 4076
ENSMUST00000031823 Herc3-002 protein_coding Mus_musculus 0 3360
ENSMUST00000154290 Herc3-006 processed_transcript Mus_musculus 0 387
ENSMUST00000131132 Herc3-008 processed_transcript Mus_musculus 0 279

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