C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00021E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059801-ENSDARG00000052851 CGP 7955 5:42554616-42722226
GeneTranscriptPositionBiotype
ENSDARG00000052851 (golph3)
golgi phosphoprotein 3 		ENSDART00000051070 (golph3-001) 42701116-42722165 protein_coding
ENSDART00000074781 (golph3-002) 42701116-42722226 protein_coding
ENSDARG00000059801 (pdzd2)
PDZ domain containing 2 		ENSDART00000083515 (pdzd2-201) 42554616-42623450 protein_coding
ENSDART00000125512 (pdzd2-202) 42667447-42668272 protein_coding
ENSDART00000135030 (pdzd2-001) 42579803-42668272 protein_coding
CIL_00021E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000133401-ENSG00000113384 CGP 9606 5:31639410-32174350
GeneTranscriptPositionBiotype
ENSG00000113384 (GOLPH3)
golgi phosphoprotein 3 (coat-protein) 		ENST00000265070 (GOLPH3-001) 32124704-32174350 protein_coding
ENST00000503610 (GOLPH3-004) 32126367-32174302 nonsense_mediated_decay
ENST00000512668 (GOLPH3-003) 32126595-32174317 processed_transcript
ENSG00000133401 (PDZD2)
PDZ domain containing 2 		ENST00000397559 (PDZD2-007) 32100867-32108771 processed_transcript
ENST00000438447 (PDZD2-001) 31639410-32110931 protein_coding
ENST00000502489 (PDZD2-004) 31854937-32077955 retained_intron
ENST00000502824 (PDZD2-003) 31692887-31843975 processed_transcript
ENST00000503961 (PDZD2-013) 32077460-32083615 processed_transcript
ENST00000509256 (PDZD2-011) 32052494-32057949 retained_intron
ENST00000510285 (PDZD2-008) 32107321-32108461 processed_transcript
ENST00000513184 (PDZD2-012) 32059332-32072317 processed_transcript
ENST00000513490 (PDZD2-006) 32099174-32110926 processed_transcript
ENST00000513852 (PDZD2-010) 31936152-31983541 processed_transcript
ENST00000513910 (PDZD2-009) 31712039-31799289 protein_coding
ENST00000515115 (PDZD2-014) 32098597-32108365 processed_transcript
ENSG00000200065 (Y_RNA)
Y RNA 		ENST00000363195 (Y_RNA.1-308) 32134738-32134834 misc_RNA
ENSG00000214108 (TPT1P5)
tumor protein, translationally-controlled 1 pseudogene 5 		ENST00000511433 (TPT1P5-001) 31908361-31909186 processed_pseudogene
ENSG00000224282 (CTD-2290C23.1)
 ENST00000463864 (CTD-2290C23.1-001) 31822561-31823136 processed_pseudogene
ENSG00000241739 (CTD-2290C23.2)
 ENST00000496412 (CTD-2290C23.2-001) 31840492-31840971 processed_pseudogene
ENSG00000243914 (RPL5P14)
ribosomal protein L5 pseudogene 14 		ENST00000494197 (RPL5P14-001) 31847271-31848148 processed_pseudogene
ENSG00000248378 (RP11-5N11.5)
 ENST00000515358 (RP11-5N11.5-001) 31743988-31744451 lincRNA
ENSG00000248624 (RP11-5N11.2)
 ENST00000509750 (RP11-5N11.2-001) 31657218-31665067 sense_intronic
ENSG00000248813 (RP11-5N11.4)
 ENST00000506865 (RP11-5N11.4-001) 31741833-31742327 lincRNA
ENSG00000248878 (RP11-5N11.1)
 ENST00000504053 (RP11-5N11.1-001) 31725539-31725902 transcribed_processed_pseudogene
ENSG00000249114 (RP11-5N11.3)
 ENST00000504817 (RP11-5N11.3-001) 31738269-31738660 sense_intronic
ENSG00000249688 (RP11-5N11.7)
 ENST00000515522 (RP11-5N11.7-001) 31754219-31754656 sense_intronic
ENSG00000249774 (CTD-2206G10.2)
 ENST00000506046 (CTD-2206G10.2-001) 31923367-31923532 processed_pseudogene
ENSG00000250164 (RP11-5N11.6)
 ENST00000509629 (RP11-5N11.6-001) 31747644-31748078 lincRNA
ENSG00000250764 (CTD-2152M20.2)
 ENST00000503441 (CTD-2152M20.2-001) 32103445-32121941 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00021E_0001ENSDARG00000052851ENSDART00000051070ENSDART00000074781ENSDARG00000059801ENSDART00000083515ENSDART00000125512ENSDART00000135030CIL_00021E_0002ENSG00000113384ENST00000265070ENST00000503610ENST00000512668ENSG00000133401ENST00000397559ENST00000438447ENST00000502489ENST00000502824ENST00000503961ENST00000509256ENST00000510285ENST00000513184ENST00000513490ENST00000513852ENST00000513910ENST00000515115ENSG00000200065ENST00000363195ENSG00000214108ENST00000511433ENSG00000224282ENST00000463864ENSG00000241739ENST00000496412ENSG00000243914ENST00000494197ENSG00000248378ENST00000515358ENSG00000248624ENST00000509750ENSG00000248813ENST00000506865ENSG00000248878ENST00000504053ENSG00000249114ENST00000504817ENSG00000249688ENST00000515522ENSG00000249774ENST00000506046ENSG00000250164ENST00000509629ENSG00000250764ENST00000503441
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00021E_0001ENSDARG00000052851ENSDART00000051070ENSDART00000074781ENSDARG00000059801ENSDART00000083515CIL_00021E_0002ENSG00000113384ENST00000265070ENST00000503610ENSG00000133401ENST00000397559ENST00000438447ENST00000502489ENST00000510285ENST00000513490ENST00000515115ENSG00000200065ENST00000363195ENSG00000214108ENST00000511433ENSG00000224282ENST00000463864ENSG00000241739ENST00000496412ENSG00000243914ENST00000494197ENSG00000248378ENST00000515358ENSG00000248624ENST00000509750ENSG00000248813ENST00000506865ENSG00000248878ENST00000504053ENSG00000249114ENST00000504817ENSG00000249688ENST00000515522ENSG00000249774ENST00000506046ENSG00000250164ENST00000509629ENSG00000250764ENST00000503441
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052851 ENSDART00000051070 N/A N/A N/A 15.306±5.29 N/A N/A 5.872±1.43 5.939±0.97 2.737±0.00 N/A 4.573±0.00 N/A N/A N/A
ENSDART00000074781 N/A N/A N/A 18.252±1.17 N/A N/A 2.958±1.87 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000059801 ENSDART00000083515 N/A N/A N/A 1.041±0.33 N/A N/A 1.122±0.55 2.042±0.68 0.046±0.00 N/A 0.106±0.00 N/A N/A N/A
ENSDART00000125512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113384 ENST00000265070 26.026±0.00 21.454±0.00 5.359±0.00 9.377±2.51 13.016±0.15 23.725±12.54 12.128±8.84 22.202±12.90 27.126±17.87 9.577±3.59 4.635±1.16 31.605±13.94 32.510±4.94 24.261±4.73
ENST00000503610 N/A N/A N/A 9.584±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000133401 ENST00000397559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.119±0.00 N/A N/A N/A
ENST00000438447 N/A N/A 1.923±0.00 2.561±0.24 N/A 0.632±0.00 5.107±3.02 0.374±0.00 0.247±0.00 N/A N/A 2.186±1.71 N/A N/A
ENST00000502489 N/A N/A 1.634±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510285 N/A N/A N/A N/A N/A N/A N/A 0.825±0.00 N/A N/A N/A N/A N/A N/A
ENST00000513184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513490 N/A 0.269±0.00 N/A N/A N/A 0.538±0.00 N/A 0.317±0.00 0.045±0.00 N/A 0.083±0.00 1.191±0.00 N/A N/A
ENST00000513852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.284±0.00 19.663±0.00
ENSG00000200065 ENST00000363195 N/A N/A N/A 0.772±0.00 0.185±0.00 N/A 0.882±0.00 N/A N/A 0.331±0.00 N/A N/A N/A N/A
ENSG00000214108 ENST00000511433 0.110±0.00 0.205±0.00 2.026±0.00 0.114±0.07 0.148±0.00 0.303±0.00 0.206±0.04 N/A 0.026±0.00 0.084±0.00 0.257±0.00 0.147±0.08 N/A 0.297±0.04
ENSG00000224282 ENST00000463864 0.125±0.00 0.213±0.00 0.507±0.00 0.132±0.05 0.311±0.00 0.229±0.00 0.159±0.01 0.209±0.00 0.073±0.00 0.206±0.00 0.437±0.33 0.107±0.00 N/A 0.121±0.07
ENSG00000241739 ENST00000496412 N/A 0.028±0.00 N/A 0.028±0.00 0.164±0.00 0.051±0.00 0.051±0.00 N/A N/A N/A 0.025±0.00 0.067±0.00 N/A 0.100±0.00
ENSG00000243914 ENST00000494197 0.014±0.00 0.057±0.00 0.245±0.00 0.114±0.03 0.099±0.00 0.039±0.00 0.352±0.08 0.141±0.00 N/A 0.024±0.01 0.164±0.00 0.026±0.01 0.022±0.00 0.047±0.00
ENSG00000248378 ENST00000515358 N/A N/A N/A N/A N/A 0.072±0.00 0.048±0.00 N/A N/A N/A N/A N/A N/A 0.023±0.00
ENSG00000248624 ENST00000509750 N/A N/A N/A 0.069±0.00 N/A N/A 0.208±0.00 N/A N/A N/A N/A N/A N/A 0.187±0.10
ENSG00000248813 ENST00000506865 N/A N/A N/A N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000248878 ENST00000504053 N/A N/A N/A N/A N/A N/A 0.060±0.00 N/A N/A N/A N/A 0.182±0.00 N/A N/A
ENSG00000249114 ENST00000504817 N/A N/A 0.403±0.00 0.091±0.00 N/A N/A 0.155±0.08 N/A N/A N/A N/A N/A N/A N/A
ENSG00000249688 ENST00000515522 N/A N/A 0.750±0.00 0.041±0.00 1.231±0.00 N/A 0.219±0.18 N/A N/A N/A N/A N/A N/A N/A
ENSG00000249774 ENST00000506046 N/A N/A N/A 0.600±0.00 N/A N/A 1.011±0.00 N/A N/A N/A N/A N/A 0.539±0.00 0.557±0.00
ENSG00000250164 ENST00000509629 N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000250764 ENST00000503441 0.170±0.00 0.216±0.00 0.381±0.00 0.337±0.07 0.270±0.12 0.127±0.00 0.044±0.01 0.276±0.00 0.193±0.00 0.242±0.17 0.205±0.00 0.427±0.13 0.150±0.08 N/A

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