C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family B (MDR/TAP), member 6 (Langereis blood group)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265316 ABCB6-001 ENSG00000115657 9606 - 2:219209768-219218990 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyOvaryPlacentaTestisENST00000265316
Transcript ID Breast Heart Kidney Ovary Placenta Testis
ENST00000265316 6.610±0.00 1.081±0.00 6.237±0.40 13.033±3.32 3.032±0.00 20.885±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0001 VISTA 2:219106772-219707284
CIL_0006EB CIL_0006EB_0001 CGP 2:219195237-219218990
CIL_0006EA CIL_0006EA_0001 CGP 2:219209768-219229717

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IDA:IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005740 IDA mitochondrial envelope
GO:0005741 IDA mitochondrial outer membrane
GO:0005768 ISS endosome
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006779 IDA porphyrin-containing compound biosynthetic process
GO:0006810 IDA:IEA transport
GO:0006879 NAS cellular iron ion homeostasis
GO:0007420 IMP brain development
GO:0015232 TAS heme transporter activity
GO:0015439 IMP heme-transporting ATPase activity
GO:0015562 IDA efflux transmembrane transporter activity
GO:0015886 IMP heme transport
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0020037 IDA heme binding
GO:0031307 IDA integral component of mitochondrial outer membrane
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0043190 NAS ATP-binding cassette (ABC) transporter complex
GO:0043588 IMP skin development
GO:0055085 IBA:IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027396 Abcb6-001 protein_coding Mus_musculus 0 2926
ENSMUST00000160081 Abcb6-003 retained_intron Mus_musculus 0 2082
ENSMUST00000159219 Abcb6-004 retained_intron Mus_musculus 0 1570
ENSMUST00000161103 Abcb6-002 retained_intron Mus_musculus 0 745
ENSMUST00000160757 Abcb6-005 retained_intron Mus_musculus 0 601
ENSMUST00000161215 Abcb6-006 protein_coding Mus_musculus 0 246

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