C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal transducing adaptor family member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265404 STAP1-001 ENSG00000035720 9606 + 4:67558728-67606898 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000265404
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000265404 0.041±0.00 6.808±0.00 0.024±0.00 0.100±0.00 0.261±0.00 0.006±0.00 3.516±0.00 0.607±0.00 0.092±0.03 0.116±0.03 0.769±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000M7 CIL_0000M7_0001 CGP 4:67471803-67607337
CIL_0000M6 CIL_0000M6_0001 CGP 4:67558728-67701179

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005070 IEA SH3/SH2 adaptor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006886 TAS intracellular protein transport
GO:0007165 TAS signal transduction
GO:0007169 IEA transmembrane receptor protein tyrosine kinase signaling pathway
GO:0009967 IEA positive regulation of signal transduction
GO:0043234 IDA protein complex
GO:0061025 TAS membrane fusion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031171 Stap1-001 protein_coding Mus_musculus 0 907
ENSMUST00000123393 Stap1-002 retained_intron Mus_musculus 0 832
ENSMUST00000138076 Stap1-005 processed_transcript Mus_musculus 0 322

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