C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: secretory carrier membrane protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000268099 SCAMP2-001 ENSG00000140497 9606 - 15:74843730-74873365 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000268099
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000268099 8.869±0.00 9.974±0.00 1.916±0.00 1.538±0.36 8.371±0.00 2.768±2.45 17.003±0.00 5.814±0.00 9.145±0.00 24.484±12.46 54.015±13.17 7.608±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UD CIL_0007UD_0001 VISTA 15:74278506-74880453
CIL_0005AU CIL_0005AU_0002 CGP 15:74843730-74902219

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005794 IDA Golgi apparatus
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0015031 IEA:IDA protein transport
GO:0016021 IEA:IDA integral component of membrane
GO:0030133 IEA transport vesicle
GO:0032588 IDA trans-Golgi network membrane
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0055038 IDA recycling endosome membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045791 Scamp2-201 protein_coding Mus_musculus 0 1301

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