C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3-domain GRB2-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000269886 SH3GL1-001 ENSG00000141985 9606 - 19:4360370-4400547 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000269886
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000269886 49.488±0.00 38.794±0.00 0.492±0.00 8.063±6.85 17.219±15.61 18.665±18.08 2.633±2.16 8.970±7.11 4.901±2.86 11.362±10.91 6.346±0.00 32.724±28.38 51.643±21.60 24.336±9.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GU CIL_0005GU_0002 CGP 19:4343527-4400547
CIL_00036Q CIL_00036Q_0001 CGP 19:4360370-4445018

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA:IDA cytoplasm
GO:0005768 IEA endosome
GO:0006897 IEA endocytosis
GO:0007165 TAS signal transduction
GO:0007417 TAS central nervous system development
GO:0008289 IEA lipid binding
GO:0016020 IEA membrane
GO:0019902 IEA phosphatase binding
GO:0030054 IEA cell junction
GO:0042802 IPI identical protein binding
GO:0042995 IEA cell projection
GO:0051020 IEA GTPase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003268 Sh3gl1-201 protein_coding Mus_musculus 0 1362

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