C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kelch domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000270583 KLHDC4-001 ENSG00000104731 9606 - 16:87707813-87765949 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderColonHeartKidneyLiverOvaryPlacentaENST00000270583
Transcript ID Adipose Bladder Colon Heart Kidney Liver Ovary Placenta
ENST00000270583 1.813±0.00 1.109±0.00 2.614±0.95 0.207±0.00 1.582±0.66 1.480±0.00 4.968±0.97 2.768±1.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WG CIL_0008WG_0001 VISTA 16:87215497-87815964
CIL_00070Q CIL_00070Q_0001 CGP 16:87406246-87698156
CIL_0002SZ CIL_0002SZ_0001 CGP 16:87601835-87765992
CIL_0002T0 CIL_0002T0_0001 CGP 16:87696485-87869488

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045884 Klhdc4-001 protein_coding Mus_musculus 0 1314
ENSMUST00000174709 Klhdc4-002 retained_intron Mus_musculus 0 1258
ENSMUST00000174717 Klhdc4-003 protein_coding Mus_musculus 0 580
ENSMUST00000174665 Klhdc4-004 nonsense_mediated_decay Mus_musculus 0 233
ENSMUST00000172470 Klhdc4-007 retained_intron Mus_musculus 6.99949e-42 176
ENSMUST00000174255 Klhdc4-006 nonsense_mediated_decay Mus_musculus 3.00004e-41 174
ENSMUST00000174192 Klhdc4-005 protein_coding Mus_musculus 8.99998e-41 172

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