C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphogluconate dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000270776 PGD-001 ENSG00000142657 9606 + 1:10399080-10420144 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000270776
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000270776 143.544±0.00 21.904±0.00 2.984±0.00 24.551±11.41 74.905±67.95 12.236±2.03 7.641±3.81 28.069±19.23 22.393±15.29 26.120±11.67 8.252±6.79 52.463±22.47 64.732±9.08 55.908±3.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IM CIL_0008IM_0001 VISTA 1:10233066-10834152
CIL_0007WE CIL_0007WE_0001 VISTA 1:10372013-10973061
CIL_00085P CIL_00085P_0001 VISTA 1:10397607-10998574

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004616 IEA:ISS phosphogluconate dehydrogenase (decarboxylating) activity
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0005975 TAS carbohydrate metabolic process
GO:0006098 IEA:ISS pentose-phosphate shunt
GO:0009051 IDA pentose-phosphate shunt, oxidative branch
GO:0019322 IEA pentose biosynthetic process
GO:0019521 IEA D-gluconate metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0050661 IEA NADP binding
GO:0055114 IDA:IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084124 Pgd-001 protein_coding Mus_musculus 0 1714
ENSMUST00000124409 Pgd-003 retained_intron Mus_musculus 0 372

Loading