C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kelch-like family member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000273963 KLHL8-001 ENSG00000145332 9606 - 4:87160103-87220608 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000273963
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000273963 1.748±0.00 1.508±0.00 0.561±0.05 1.894±0.04 1.254±0.00 1.308±0.00 0.401±0.00 0.767±0.00 4.563±0.00 1.128±0.37 0.835±0.16 1.452±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BR CIL_0000BR_0001 CGP 4:86935002-87240314
CIL_0000BS CIL_0000BS_0001 CGP 4:87160103-87322906

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0016567 IDA protein ubiquitination
GO:0031463 IDA Cul3-RING ubiquitin ligase complex
GO:0042787 IDA protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031254 Klhl8-001 protein_coding Mus_musculus 0 1890
ENSMUST00000112815 Klhl8-004 protein_coding Mus_musculus 0 1559
ENSMUST00000112811 Klhl8-002 protein_coding Mus_musculus 0 1208
ENSMUST00000131843 Klhl8-003 nonsense_mediated_decay Mus_musculus 0 1022
ENSMUST00000147184 Klhl8-005 retained_intron Mus_musculus 0 505
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000005 66

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