C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000BR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172493-ENSG00000145332 CGP 9606 4:86935002-87240314
GeneTranscriptPositionBiotype
ENSG00000145332 (KLHL8)
kelch-like family member 8 		ENST00000273963 (KLHL8-001) 87160103-87220608 protein_coding
ENST00000425278 (KLHL8-003) 87161043-87220525 protein_coding
ENST00000498875 (KLHL8-002) 87160249-87220536 protein_coding
ENST00000504029 (KLHL8-006) 87170199-87220545 processed_transcript
ENST00000505388 (KLHL8-007) 87163883-87220497 processed_transcript
ENST00000506274 (KLHL8-008) 87219524-87240314 processed_transcript
ENST00000506985 (KLHL8-004) 87162444-87220463 nonsense_mediated_decay
ENST00000512111 (KLHL8-005) 87162522-87220268 protein_coding
ENSG00000163633 (C4orf36)
chromosome 4 open reading frame 36 		ENST00000295898 (C4orf36-001) 86876205-86892395 protein_coding
ENST00000462714 (C4orf36-003) 86886797-86892410 nonsense_mediated_decay
ENST00000473559 (C4orf36-002) 86886472-86934732 protein_coding
ENST00000503001 (C4orf36-012) 86888140-86936178 processed_transcript
ENST00000503159 (C4orf36-006) 86935451-86936202 processed_transcript
ENST00000504008 (C4orf36-008) 86887871-86892413 protein_coding
ENST00000504371 (C4orf36-010) 86888160-86892422 processed_transcript
ENST00000506308 (C4orf36-011) 86887775-86892416 protein_coding
ENST00000506484 (C4orf36-005) 86925867-86936179 retained_intron
ENST00000508280 (C4orf36-004) 86924894-86934850 retained_intron
ENST00000509262 (C4orf36-007) 86933165-86934542 retained_intron
ENST00000512468 (C4orf36-009) 86887845-86892320 nonsense_mediated_decay
ENSG00000172493 (AFF1)
AF4/FMR2 family, member 1 		ENST00000307808 (AFF1-001) 87006988-87141038 protein_coding
ENST00000395146 (AFF1-201) 86935002-87141054 protein_coding
ENST00000503369 (AFF1-006) 87114943-87125277 retained_intron
ENST00000503477 (AFF1-008) 86935050-87105682 protein_coding
ENST00000504956 (AFF1-002) 86935002-87048049 retained_intron
ENST00000507468 (AFF1-007) 86935011-87091824 protein_coding
ENST00000511442 (AFF1-005) 86936410-87046890 protein_coding
ENST00000511722 (AFF1-003) 87007243-87108300 protein_coding
ENST00000511996 (AFF1-009) 86935074-86974068 processed_transcript
ENST00000514970 (AFF1-004) 87049652-87108312 protein_coding
ENST00000544085 (AFF1-202) 87007396-87135701 protein_coding
ENSG00000235043 (TECRP1)
trans-2,3-enoyl-CoA reductase pseudogene 1 		ENST00000513307 (TECRP1-001) 86949669-86950113 processed_pseudogene
ENSG00000248180 (GAPDHP60)
glyceraldehyde-3-phosphate dehydrogenase pseudogene 60 		ENST00000513846 (GAPDHP60-001) 87207092-87208086 processed_pseudogene
ENSG00000248196 (RP11-476C8.2)
 ENST00000505836 (RP11-476C8.2-001) 87166844-87167734 processed_pseudogene
CIL_0000BR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029313-ENSMUSG00000029312 CGP 10090 5:103692374-103911259
GeneTranscriptPositionBiotype
ENSMUSG00000029312 (Klhl8)
kelch-like 8 		ENSMUST00000031254 (Klhl8-001) 103862050-103911259 protein_coding
ENSMUST00000112811 (Klhl8-002) 103861973-103886290 protein_coding
ENSMUST00000112815 (Klhl8-004) 103861973-103886290 protein_coding
ENSMUST00000131843 (Klhl8-003) 103862080-103886290 nonsense_mediated_decay
ENSMUST00000147184 (Klhl8-005) 103870310-103874369 retained_intron
ENSMUSG00000029313 (Aff1)
AF4/FMR2 family, member 1 		ENSMUST00000031256 (Aff1-201) 103754573-103855322 protein_coding
ENSMUST00000054979 (Aff1-001) 103754162-103855322 protein_coding
ENSMUST00000126335 (Aff1-003) 103692374-103816428 retained_intron
ENSMUST00000152145 (Aff1-004) 103784359-103811595 retained_intron
ENSMUST00000153165 (Aff1-002) 103754564-103842253 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000BR_0001ENSG00000145332ENST00000273963ENST00000425278ENST00000498875ENST00000504029ENST00000506985ENST00000512111ENSG00000163633ENST00000295898ENST00000462714ENST00000473559ENST00000503001ENST00000503159ENST00000506308ENST00000506484ENST00000508280ENST00000509262ENST00000512468ENSG00000172493ENST00000307808ENST00000395146ENST00000504956ENST00000511996ENSG00000235043ENST00000513307ENSG00000248180ENST00000513846ENSG00000248196ENST00000505836CIL_0000BR_0002ENSMUSG00000029312ENSMUST00000031254ENSMUST00000112815ENSMUST00000131843ENSMUST00000147184ENSMUSG00000029313ENSMUST00000031256ENSMUST00000054979ENSMUST00000126335
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145332 ENST00000273963 1.748±0.00 N/A N/A 1.508±0.00 0.561±0.05 1.894±0.04 1.254±0.00 1.308±0.00 0.401±0.00 0.767±0.00 4.563±0.00 1.128±0.37 0.835±0.16 1.452±0.59
ENST00000425278 1.523±0.00 1.054±0.00 0.865±0.00 1.446±0.81 1.510±0.82 0.878±0.00 0.881±0.17 1.263±0.00 1.119±0.85 2.257±1.32 1.299±0.15 1.073±0.55 0.633±0.38 1.389±0.49
ENST00000498875 N/A 0.526±0.00 0.777±0.00 0.955±0.01 0.907±0.16 0.695±0.27 0.284±0.00 2.111±0.28 0.559±0.00 0.690±0.06 1.186±0.00 0.314±0.00 0.312±0.00 1.533±0.00
ENST00000504029 N/A N/A N/A N/A N/A 6.040±0.00 N/A N/A N/A N/A 2.396±0.00 4.148±1.68 2.029±0.00 3.818±0.00
ENST00000505388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506985 N/A N/A N/A 3.151±0.00 1.113±0.00 1.816±0.00 0.631±0.00 2.586±0.00 2.462±0.00 N/A N/A N/A N/A N/A
ENST00000512111 N/A N/A 1.071±0.00 N/A N/A N/A 1.035±0.00 N/A 2.058±0.00 1.314±0.00 0.651±0.00 1.590±0.00 N/A 0.854±0.00
ENSG00000163633 ENST00000295898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.647±0.00
ENST00000462714 0.303±0.00 N/A N/A 0.207±0.00 N/A N/A N/A N/A N/A 0.410±0.00 N/A 0.524±0.08 N/A 0.775±0.00
ENST00000473559 0.345±0.00 0.930±0.00 0.399±0.00 1.155±0.00 0.826±0.23 0.381±0.00 0.672±0.33 1.218±0.00 0.413±0.24 0.175±0.00 N/A 0.518±0.29 0.500±0.08 0.948±0.08
ENST00000503001 N/A N/A N/A N/A N/A 0.797±0.00 N/A N/A N/A 0.404±0.00 N/A N/A N/A N/A
ENST00000503159 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.393±0.00 N/A N/A N/A N/A
ENST00000504008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.326±0.00
ENST00000506484 N/A N/A N/A N/A 0.870±0.00 N/A N/A N/A 0.251±0.00 1.329±0.00 0.859±0.00 N/A 1.929±0.00 N/A
ENST00000508280 0.327±0.00 N/A 1.058±0.00 0.136±0.00 0.743±0.30 0.615±0.20 0.417±0.00 0.645±0.00 0.459±0.00 0.633±0.00 0.202±0.00 0.270±0.00 1.558±0.00 N/A
ENST00000509262 N/A N/A N/A N/A N/A 1.511±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.722±0.00 N/A N/A N/A
ENSG00000172493 ENST00000307808 7.306±0.00 1.440±0.00 1.250±0.00 0.879±0.00 2.117±0.00 2.493±0.00 3.702±0.00 2.767±0.00 2.693±0.00 4.097±0.29 4.501±2.59 1.841±0.49 1.848±0.00 1.471±1.14
ENST00000395146 4.738±0.00 1.759±0.00 2.081±0.00 1.673±0.46 1.450±0.00 2.252±0.00 3.477±0.00 2.199±0.00 0.912±0.24 3.616±1.07 9.781±0.00 3.820±3.24 2.524±1.64 0.943±0.61
ENST00000503369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504956 N/A N/A N/A 1.738±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.433±0.00 N/A N/A N/A
ENST00000514970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000235043 ENST00000513307 0.063±0.00 N/A N/A 1.235±0.00 N/A 0.963±0.00 N/A N/A N/A 2.052±0.00 N/A 0.098±0.00 0.172±0.00 N/A
ENSG00000248180 ENST00000513846 N/A 0.175±0.00 0.132±0.00 0.256±0.02 0.385±0.00 0.269±0.00 0.324±0.00 0.870±0.00 N/A 0.275±0.00 N/A 0.199±0.08 N/A 0.241±0.00
ENSG00000248196 ENST00000505836 N/A 0.072±0.00 N/A 0.058±0.00 N/A 0.980±0.00 0.016±0.00 N/A N/A N/A N/A 0.088±0.05 N/A 0.098±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029312 ENSMUST00000031254 6.131±1.50 3.645±0.65 3.821±0.22 11.079±2.92 3.997±1.29 1.663±0.55 4.974±0.77 3.293±0.43 0.903±0.16 4.465±1.19 7.742±1.82 7.707±2.70 1.634±0.16 7.300±2.76
ENSMUST00000112811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112815 N/A N/A N/A N/A N/A 0.293±0.00 N/A N/A N/A N/A N/A 2.033±0.34 N/A 0.579±0.00
ENSMUST00000131843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.149±0.00
ENSMUST00000147184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.196±0.00
ENSMUSG00000029313 ENSMUST00000031256 N/A N/A N/A N/A 0.802±0.00 1.369±0.00 0.450±0.00 N/A 1.752±1.20 N/A 1.090±0.00 5.294±0.00 0.683±0.49 N/A
ENSMUST00000054979 3.516±1.05 2.235±0.99 4.553±0.49 0.646±0.21 2.999±0.86 3.998±1.58 2.845±0.33 5.101±1.48 2.758±1.35 8.559±0.83 3.757±0.72 3.809±1.72 1.149±0.66 0.481±0.25
ENSMUST00000126335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.011±0.00 N/A N/A
ENSMUST00000152145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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