C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000278302 TRIM6-001 ENSG00000121236 9606 + 11:5596109-5612952 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverLungMuscleOvaryPlacentaTestisENST00000278302
Transcript ID Brain Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000278302 0.158±0.00 0.200±0.00 0.526±0.00 0.397±0.00 0.193±0.00 0.714±0.00 1.927±0.59 1.145±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003R8 CIL_0003R8_0002 CGP 11:5248083-5645789

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding
GO:0070206 IDA protein trimerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098180 Trim6-001 protein_coding Mus_musculus 0 1262
ENSMUST00000097023 Trim6-006 protein_coding Mus_musculus 0 1003

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