C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hydroxysteroid (17-beta) dehydrogenase 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000278353 HSD17B12-001 ENSG00000149084 9606 + 11:43680709-43856610 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000278353
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000278353 19.261±0.00 16.747±0.00 6.695±0.00 15.901±11.25 21.071±6.11 16.634±6.20 9.900±4.13 17.755±5.45 14.861±8.01 14.474±10.34 3.953±3.08 13.488±4.94 12.396±2.97 17.792±1.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UX CIL_0002UX_0002 CGP 11:43556436-43920266

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001968 IEA fibronectin binding
GO:0004303 IEA estradiol 17-beta-dehydrogenase activity
GO:0005515 IPI protein binding
GO:0005518 IEA collagen binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006633 IEA fatty acid biosynthetic process
GO:0006703 IEA estrogen biosynthetic process
GO:0008152 IEA metabolic process
GO:0008201 IEA heparin binding
GO:0010811 IEA positive regulation of cell-substrate adhesion
GO:0016021 IEA integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0019432 TAS triglyceride biosynthetic process
GO:0030198 IEA extracellular matrix organization
GO:0031012 IEA extracellular matrix
GO:0035338 TAS long-chain fatty-acyl-CoA biosynthetic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028619 Hsd17b12-001 protein_coding Mus_musculus 0 946
ENSMUST00000127084 Hsd17b12-004 processed_transcript Mus_musculus 0 660
ENSMUST00000146580 Hsd17b12-005 processed_transcript Mus_musculus 0 551
ENSMUST00000145967 Hsd17b12-002 processed_transcript Mus_musculus 0 335

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