C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: retinal outer segment membrane protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000278833 ROM1-001 ENSG00000149489 9606 + 11:62612741-62615120 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENST00000278833
Transcript ID Brain Testis
ENST00000278833 6.819±5.66 3.605±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0001 VISTA 11:62298635-62900076

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001750 IEA photoreceptor outer segment
GO:0005887 TAS integral component of plasma membrane
GO:0007155 IEA cell adhesion
GO:0007601 IEA visual perception
GO:0010468 IEA regulation of gene expression
GO:0016021 IEA integral component of membrane
GO:0042622 IEA photoreceptor outer segment membrane
GO:0060042 IEA retina morphogenesis in camera-type eye
GO:0060219 IEA camera-type eye photoreceptor cell differentiation
GO:0061298 IEA retina vasculature development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096242 Rom1-201 protein_coding Mus_musculus 0 1245

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