C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myelin regulatory factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000278836 MYRF-001 ENSG00000124920 9606 + 11:61752649-61788518 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000278836
Transcript ID Brain
ENST00000278836 31.700±26.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WT CIL_0007WT_0001 VISTA 11:61244303-61847279

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 ISS nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0014003 ISS oligodendrocyte development
GO:0016021 IEA integral component of membrane
GO:0022010 ISS central nervous system myelination
GO:0031643 ISS positive regulation of myelination
GO:0032286 ISS central nervous system myelin maintenance
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0048709 ISS oligodendrocyte differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088013 Myrf-003 protein_coding Mus_musculus 0 3969
ENSMUST00000186056 Myrf-001 protein_coding Mus_musculus 0 2968
ENSMUST00000190922 Myrf-002 retained_intron Mus_musculus 0 2953
ENSMUST00000189897 Myrf-005 protein_coding Mus_musculus 0 2904
ENSMUST00000186854 Myrf-004 protein_coding Mus_musculus 0 745
ENSMUST00000189439 Myrf-006 retained_intron Mus_musculus 0 610

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