C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ninein-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000278886 NINL-007 ENSG00000101004 9606 - 20:25452705-25585517 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000278886
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000278886 0.559±0.00 2.660±0.00 0.387±0.15 0.995±0.42 0.219±0.00 0.468±0.26 2.608±2.18 0.236±0.00 0.534±0.00 7.059±0.54 0.719±0.32 3.949±1.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XS CIL_0000XS_0001 CGP 20:25407727-25585517
CIL_0001A4 CIL_0001A4_0001 CGP 20:25452705-25624175

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0005509 IEA calcium ion binding
GO:0005829 TAS cytosol
GO:0005874 IEA microtubule

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109896 Ninl-001 protein_coding Mus_musculus 0 1740
ENSMUST00000150595 Ninl-006 protein_coding Mus_musculus 0 507
ENSMUST00000149979 Ninl-002 processed_transcript Mus_musculus 0 370
ENSMUST00000128627 Ninl-004 protein_coding Mus_musculus 0 364
ENSMUST00000128564 Ninl-003 processed_transcript Mus_musculus 0 363
ENSMUST00000149268 Ninl-005 processed_transcript Mus_musculus 8.40779e-45 187

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