C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ninein-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109896 Ninl-001 ENSMUSG00000068115 10090 - 2:150934519-151009398 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109896
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109896 1.295±0.76 6.373±0.48 1.640±0.11 3.065±0.67 0.359±0.10 0.667±0.14 0.270±0.06 4.180±0.61 3.848±4.75 1.013±0.17 0.079±0.03 6.634±1.78 0.938±0.43 9.585±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XS CIL_0000XS_0002 CGP 2:150905400-151039382
CIL_0001A4 CIL_0001A4_0002 CGP 2:150934519-151039398

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278886 NINL-007 protein_coding Homo_sapiens 0 1740
ENST00000422516 NINL-201 protein_coding Homo_sapiens 0 1740
ENST00000461642 NINL-006 processed_transcript Homo_sapiens 4.2039e-45 185
ENST00000489780 NINL-004 processed_transcript Homo_sapiens 0 431

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