C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KH domain containing, RNA binding, signal transduction associated 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000281156 KHDRBS2-001 ENSG00000112232 9606 - 6:61679960-62286227 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverLungOvaryPlacentaENST00000281156
Transcript ID Adipose Brain Breast Colon Heart Liver Lung Ovary Placenta
ENST00000281156 0.014±0.00 0.693±0.00 0.054±0.05 0.008±0.00 0.017±0.00 0.076±0.00 0.359±0.00 0.029±0.01 0.092±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008143 IEA poly(A) binding
GO:0008266 IEA poly(U) RNA binding
GO:0017124 IEA SH3 domain binding
GO:0042169 IEA SH2 domain binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027226 Khdrbs2-001 protein_coding Mus_musculus 0 2780
ENSMUST00000188257 Khdrbs2-003 protein_coding Mus_musculus 0 521
ENSMUST00000189878 Khdrbs2-002 protein_coding Mus_musculus 0 346
ENSMUST00000185666 Khdrbs2-004 protein_coding Mus_musculus 0 335
ENSMUST00000186984 Khdrbs2-005 processed_transcript Mus_musculus 0 257
ENSMUST00000066257 Khdrbs1-002 protein_coding Mus_musculus 2.00386e-43 182
ENSMUST00000129342 Khdrbs1-001 nonsense_mediated_decay Mus_musculus 2.00386e-43 182

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