C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bone morphogenetic protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000283147 BMP6-001 ENSG00000153162 9606 + 6:7726797-7881422 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeLungPlacentaENST00000283147
Transcript ID Adipose Lung Placenta
ENST00000283147 29.873±0.00 17.103±0.00 27.749±3.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T6 CIL_0007T6_0001 VISTA 6:7260927-7862502
CIL_000380 CIL_000380_0001 CGP 6:7590199-7881422
CIL_000161 CIL_000161_0002 CGP 6:7726797-8064364

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 TAS skeletal system development
GO:0001503 IEA ossification
GO:0001649 IEA osteoblast differentiation
GO:0001654 IEA eye development
GO:0001822 IEA kidney development
GO:0001938 IEA positive regulation of endothelial cell proliferation
GO:0001958 IEA endochondral ossification
GO:0003323 IDA type B pancreatic cell development
GO:0005125 IEA cytokine activity
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0005737 IEA cytoplasm
GO:0006879 IEA cellular iron ion homeostasis
GO:0006954 IEA inflammatory response
GO:0006955 IMP immune response
GO:0008083 IEA growth factor activity
GO:0010039 IEA response to iron ion
GO:0010862 IDA positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0014823 IEA response to activity
GO:0030154 IEA cell differentiation
GO:0030501 IDA positive regulation of bone mineralization
GO:0030509 IDA BMP signaling pathway
GO:0030539 IEA male genitalia development
GO:0031988 IEA membrane-bounded vesicle
GO:0032026 IEA response to magnesium ion
GO:0032332 IEA positive regulation of chondrocyte differentiation
GO:0032349 IDA positive regulation of aldosterone biosynthetic process
GO:0032526 IEA response to retinoic acid
GO:0040007 IEA growth
GO:0045603 IEA positive regulation of endothelial cell differentiation
GO:0045666 IEA positive regulation of neuron differentiation
GO:0045669 IDA positive regulation of osteoblast differentiation
GO:0045944 NAS positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IDA protein heterodimerization activity
GO:0050679 IDA positive regulation of epithelial cell proliferation
GO:0050714 NAS positive regulation of protein secretion
GO:0051216 IEA cartilage development
GO:0051384 IEA response to glucocorticoid
GO:0060395 IDA SMAD protein signal transduction
GO:0070700 IDA BMP receptor binding
GO:0071260 IEA cellular response to mechanical stimulus
GO:2000105 NAS positive regulation of DNA-dependent DNA replication
GO:2000860 IEA positive regulation of aldosterone secretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171970 Bmp6-201 protein_coding Mus_musculus 0 2006

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