C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3 domain containing ring finger 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000284637 SH3RF1-001 ENSG00000154447 9606 - 4:169094256-169271105 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000284637
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000284637 5.094±0.00 0.736±0.00 2.105±0.00 4.282±1.40 2.400±0.02 2.762±0.42 1.106±0.68 5.887±0.00 0.244±0.00 3.473±1.04 5.233±0.00 4.090±1.08 3.031±1.87 3.192±0.77

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005794 IEA Golgi apparatus
GO:0005829 IDA cytosol
GO:0006915 IEA apoptotic process
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0042995 IEA cell projection
GO:0043066 IMP negative regulation of apoptotic process
GO:0043154 IMP negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0046328 IEA regulation of JNK cascade
GO:0046872 IEA metal ion binding
GO:2001237 IMP negative regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034060 Sh3rf1-201 protein_coding Mus_musculus 0 3367

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