C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 10 open reading frame 90
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000284694 C10orf90-201 ENSG00000154493 9606 - 10:126425009-126521441 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonOvaryTestisENST00000284694
Transcript ID Breast Colon Ovary Testis
ENST00000284694 0.102±0.00 0.020±0.00 0.024±0.00 0.858±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VM CIL_0003VM_0001 CGP 10:126012381-126670446
CIL_00047A CIL_00047A_0002 CGP 10:126424997-127452517

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005813 IEA:IDA centrosome
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0007095 IEA mitotic G2 DNA damage checkpoint
GO:0009411 IEA response to UV
GO:0010212 IEA response to ionizing radiation
GO:0015629 IDA actin cytoskeleton
GO:0030308 IEA negative regulation of cell growth
GO:0042826 IEA histone deacetylase binding
GO:0050821 IEA protein stabilization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172947 D7Ertd443e-003 protein_coding Mus_musculus 0 1122
ENSMUST00000094002 D7Ertd443e-001 protein_coding Mus_musculus 0 1007
ENSMUST00000106129 D7Ertd443e-002 protein_coding Mus_musculus 0 665

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