C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDZ and LIM domain 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000284770 PDLIM3-001 ENSG00000154553 9606 - 4:185501697-185535508 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLiverMuscleTestisENST00000284770
Transcript ID Breast Heart Liver Muscle Testis
ENST00000284770 27.869±0.00 9.733±0.00 0.209±0.00 519.524±163.06 15.828±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000H0 CIL_0000H0_0003 CGP 4:185500660-185956652

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0007015 IEA actin filament organization
GO:0007507 IEA heart development
GO:0008092 IEA cytoskeletal protein binding
GO:0008270 IEA zinc ion binding
GO:0008307 IEA structural constituent of muscle
GO:0015629 IEA actin cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034053 Pdlim3-201 protein_coding Mus_musculus 0 416

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