C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDZ and LIM domain 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000284771 PDLIM3-002 ENSG00000154553 9606 - 4:185501751-185535612 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000284771
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000284771 7.429±0.00 12.821±0.00 2.340±1.75 13.106±6.01 28.628±17.69 17.066±12.98 6.896±0.00 13.275±12.15 22.914±17.93 23.412±13.50 12.461±9.06 40.245±39.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000H0 CIL_0000H0_0003 CGP 4:185500660-185956652

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034053 Pdlim3-201 protein_coding Mus_musculus 0 1131

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