C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADAM metallopeptidase with thrombospondin type 1 motif, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000284984 ADAMTS1-001 ENSG00000154734 9606 - 21:26835747-26845409 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000284984
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000284984 19.255±0.00 12.356±0.00 2.352±0.00 2.315±0.00 6.369±0.51 6.135±4.17 3.064±1.28 3.025±2.86 2.608±1.99 20.311±0.00 4.196±0.17 20.515±12.82 63.177±43.96 4.295±0.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000335 CIL_000335_0001 CGP 21:26466209-26845409
CIL_0008UA CIL_0008UA_0001 VISTA 21:26654008-27255434
CIL_00032M CIL_00032M_0001 CGP 21:26835747-26966513

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001542 IEA ovulation from ovarian follicle
GO:0001822 IEA kidney development
GO:0004222 IEA metalloendopeptidase activity
GO:0005515 IEA protein binding
GO:0005604 IEA basement membrane
GO:0005737 IDA cytoplasm
GO:0006508 IEA proteolysis
GO:0007229 TAS integrin-mediated signaling pathway
GO:0008201 IEA heparin binding
GO:0008237 TAS metallopeptidase activity
GO:0008270 IEA zinc ion binding
GO:0008285 TAS negative regulation of cell proliferation
GO:0031012 IEA extracellular matrix
GO:0031410 IEA cytoplasmic vesicle
GO:0060347 IEA heart trabecula formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023610 Adamts1-001 protein_coding Mus_musculus 0 2351
ENSMUST00000125897 Adamts1-002 protein_coding Mus_musculus 0 2122

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