C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein S17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000285298 MRPS17-001 ENSG00000239789 9606 + 7:55951819-55956501 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverOvaryPlacentaTestisENST00000285298
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000285298 5.671±0.00 7.906±0.00 6.192±0.00 4.224±0.00 3.535±0.00 6.324±3.20 5.405±0.00 10.186±0.42 5.964±0.97 8.944±2.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000646 CIL_000646_0001 CGP 7:55793544-55955239

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA:NAS structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005763 NAS mitochondrial small ribosomal subunit
GO:0005840 IEA ribosome
GO:0006412 IEA:NAS translation
GO:0019843 IEA rRNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119985 Mrps17-010 protein_coding Mus_musculus 0 315
ENSMUST00000121813 Mrps17-009 protein_coding Mus_musculus 0 315
ENSMUST00000119604 Mrps17-003 protein_coding Mus_musculus 0 315
ENSMUST00000121339 Mrps17-004 protein_coding Mus_musculus 0 315
ENSMUST00000118420 Mrps17-006 protein_coding Mus_musculus 0 315
ENSMUST00000042191 Mrps17-002 protein_coding Mus_musculus 0 315
ENSMUST00000119576 Mrps17-001 protein_coding Mus_musculus 0 315
ENSMUST00000136108 Mrps17-008 protein_coding Mus_musculus 0 274
ENSMUST00000145720 Prpf38b-002 processed_transcript Mus_musculus 0.00003 55

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