C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000287590 B3GNT7-001 ENSG00000156966 9606 + 2:231395543-231401164 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000287590
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000287590 0.661±0.00 1.907±0.00 0.092±0.00 3.083±0.00 1.619±0.09 3.636±0.00 1.700±0.00 1.224±0.00 0.398±0.00 8.905±8.27 0.024±0.00 8.057±4.93 13.517±6.06 2.244±1.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004L0 CIL_0004L0_0002 CGP 2:231198546-231401164
CIL_000899 CIL_000899_0001 VISTA 2:231361987-231963495
CIL_0007WD CIL_0007WD_0001 VISTA 2:231362545-231967398
CIL_0004KZ CIL_0004KZ_0002 CGP 2:231395543-231483641

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0006486 IEA protein glycosylation
GO:0008378 IEA galactosyltransferase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016266 TAS O-glycan processing
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0018146 TAS keratan sulfate biosynthetic process
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0042339 TAS keratan sulfate metabolic process
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113306 B3gnt7-001 protein_coding Mus_musculus 0 1066
ENSMUST00000188695 B3gnt7-003 protein_coding Mus_musculus 0 691

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