C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5-hydroxytryptamine (serotonin) receptor 5A, G protein-coupled
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000287907 HTR5A-001 ENSG00000157219 9606 + 7:155070324-155085749 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonTestisENST00000287907
Transcript ID Brain Colon Testis
ENST00000287907 4.739±0.92 0.028±0.00 0.239±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000K5 CIL_0000K5_0002 CGP 7:154943687-155085749
CIL_00026E CIL_00026E_0001 CGP 7:155070324-155310235

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0004993 IDA serotonin receptor activity
GO:0005791 IEA rough endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005886 TAS plasma membrane
GO:0005887 IEA integral component of plasma membrane
GO:0007186 TAS:IEA G-protein coupled receptor signaling pathway
GO:0007187 IEA G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger
GO:0007210 IEA serotonin receptor signaling pathway
GO:0007420 IEA brain development
GO:0016021 IEA integral component of membrane
GO:0019933 IEA cAMP-mediated signaling
GO:0021766 IEA hippocampus development
GO:0030425 IEA dendrite
GO:0032355 IEA response to estradiol
GO:0043204 IEA perikaryon

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000099192 htr5al-201 protein_coding Danio_rerio 0 516
ENSDART00000139139 htr5al-001 protein_coding Danio_rerio 0 516

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