C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neutrophil cytosolic factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000289473 NCF1-001 ENSG00000158517 9606 + 7:74773962-74789313 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartOvaryPlacentaENST00000289473
Transcript ID Adipose Adrenal Breast Heart Ovary Placenta
ENST00000289473 0.318±0.00 1.067±0.00 0.174±0.00 0.158±0.00 0.424±0.39 5.546±0.75

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001878 IEA response to yeast
GO:0001909 IEA leukocyte mediated cytotoxicity
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0002479 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0002679 IEA respiratory burst involved in defense response
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005791 IEA rough endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005829 IDA cytosol
GO:0005886 IEA plasma membrane
GO:0006612 IDA protein targeting to membrane
GO:0006691 IEA leukotriene metabolic process
GO:0006801 TAS superoxide metabolic process
GO:0006915 IEA apoptotic process
GO:0006954 IEA inflammatory response
GO:0006968 IEA cellular defense response
GO:0008283 IEA cell proliferation
GO:0009055 TAS electron carrier activity
GO:0009617 IEA response to bacterium
GO:0016020 IEA membrane
GO:0016175 IMP superoxide-generating NADPH oxidase activity
GO:0017124 IPI SH3 domain binding
GO:0019898 IDA extrinsic component of membrane
GO:0030425 IEA dendrite
GO:0032010 TAS phagolysosome
GO:0035091 IDA:IEA phosphatidylinositol binding
GO:0042554 IMP superoxide anion generation
GO:0042590 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0042742 IEA defense response to bacterium
GO:0043020 IDA NADPH oxidase complex
GO:0043025 IEA neuronal cell body
GO:0043325 IDA phosphatidylinositol-3,4-bisphosphate binding
GO:0045087 TAS innate immune response
GO:0045730 TAS respiratory burst
GO:0045986 IEA negative regulation of smooth muscle contraction
GO:0050665 IEA hydrogen peroxide biosynthetic process
GO:0050830 IEA defense response to Gram-positive bacterium
GO:0050832 IEA defense response to fungus
GO:0051701 TAS interaction with host
GO:0055114 IEA oxidation-reduction process
GO:0070946 IEA neutrophil mediated killing of gram-positive bacterium
GO:0070947 IEA neutrophil mediated killing of fungus
GO:0090382 TAS phagosome maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111275 Ncf1-001 protein_coding Mus_musculus 0 963
ENSMUST00000146354 Ncf1-004 nonsense_mediated_decay Mus_musculus 0 963
ENSMUST00000144086 Ncf1-003 protein_coding Mus_musculus 0 907
ENSMUST00000016094 Ncf1-002 protein_coding Mus_musculus 0 907
ENSMUST00000139249 Ncf1-005 retained_intron Mus_musculus 0 562

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