C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor coactivator 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000290231 NCOA5-001 ENSG00000124160 9606 - 20:46060985-46089952 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000290231
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000290231 2.962±0.00 6.295±0.00 1.145±0.51 2.993±0.00 3.102±0.00 5.279±0.00 2.852±1.97 2.714±0.86 1.979±0.24 5.864±0.00 11.193±10.55 13.545±4.57 23.130±9.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BH CIL_0007BH_0001 CGP 20:46021717-46089952
CIL_0007BI CIL_0007BI_0001 CGP 20:46060985-46129863

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003682 IEA chromatin binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0015629 IDA actin cytoskeleton
GO:0042593 IEA glucose homeostasis
GO:0044822 IDA poly(A) RNA binding
GO:0046627 IEA negative regulation of insulin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040381 Ncoa5-001 protein_coding Mus_musculus 0 2468
ENSMUST00000122070 Ncoa5-008 protein_coding Mus_musculus 0 2318
ENSMUST00000121377 Ncoa5-007 protein_coding Mus_musculus 0 1602
ENSMUST00000123347 Ncoa5-002 retained_intron Mus_musculus 0 608
ENSMUST00000127545 Ncoa5-003 retained_intron Mus_musculus 0 532
ENSMUST00000153905 Ncoa5-005 protein_coding Mus_musculus 0 444
ENSMUST00000141663 Ncoa5-006 retained_intron Mus_musculus 0 270
ENSMUST00000126685 Ncoa5-004 processed_transcript Mus_musculus 1e-26 126

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