C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 126
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000292363 RNF126-001 ENSG00000070423 9606 - 19:647530-663277 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000292363
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000292363 15.536±0.00 19.972±0.00 5.369±4.29 4.164±2.03 12.578±0.00 7.310±0.00 15.652±0.00 4.242±3.98 32.028±0.00 10.575±6.33 12.382±1.64 37.534±14.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0001 VISTA 19:477571-1083531
CIL_00008H CIL_00008H_0001 CGP 19:639879-663277
CIL_0004VK CIL_0004VK_0001 CGP 19:647526-683390

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005154 IEA epidermal growth factor receptor binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006513 IDA protein monoubiquitination
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0032880 IMP regulation of protein localization
GO:0042059 IMP negative regulation of epidermal growth factor receptor signaling pathway
GO:0042127 IMP regulation of cell proliferation
GO:0042147 IMP retrograde transport, endosome to Golgi
GO:0042787 IMP protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0043161 IDA proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043162 IMP ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0046872 IEA metal ion binding
GO:0061630 IDA ubiquitin protein ligase activity
GO:0070534 ISS protein K63-linked ubiquitination
GO:0070936 ISS protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047203 Rnf126-201 protein_coding Mus_musculus 0 1227

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