C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | protein phosphatase 1, regulatory subunit 16A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000292539  |
PPP1R16A-001 |
ENSG00000160972 |
9606 | + |
8:144490030-144502121  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007SS | CIL_0007SS_0001 | VISTA | 8:143880613-144482307 |
| CIL_00064G | CIL_00064G_0002 | CGP | 8:144473412-144502121 |
| CIL_0000W0 | CIL_0000W0_0001 | CGP | 8:144477969-144507174 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003779 | IEA | actin binding |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005886 | IEA | plasma membrane |
| GO:0007010 | IEA | cytoskeleton organization |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000037551
|
Ppp1r16a-001 | protein_coding | Mus_musculus | 0 | 1415 |
|
ENSMUST00000150399
|
Ppp1r16a-003 | nonsense_mediated_decay | Mus_musculus | 0 | 734 |
|
ENSMUST00000127674
|
Ppp1r16a-002 | retained_intron | Mus_musculus | 0 | 664 |
